Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3622: 11990 - KOG0254 Predicted transporter (major facilitator superfamily), at 186018 to 188381 11990 mRNA_3623: 11991 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 190258 to 192689 11991 mRNA_3624: 11992 - SUPERFAMILY--SSF52047, at 193379 to 194590 11992 mRNA_3625: 11993 - K01176 AMY, amyA, malS alpha-amylase, at 194842 to 197624 11993 mRNA_3626: 11994 - BLAST SH3 domain-containing protein [Rhizoctonia solani AG-..., at 198016 to 198652 11994
Group Condition mRNA_3622 mRNA_3623 mRNA_3624 mRNA_3625 mRNA_3626
11990
11991
11992
11993
11994
growth on oleic acid YNB Oleic Acid -1.1 -0.5 -0.7 0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.1 -0.7 -0.0 0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.1 -1.4 -0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.3 -1.1 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.1 0.4 0.1 -1.3
growth on ricinoleic acid YNB Methylricinoleic Acid -1.4 -0.3 0.6 0.1 0.2
growth on oleic acid YNB Glucose -0.3 -0.2 -0.3 0.2 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.8 -0.6 -0.0 -0.3
growth on ricinoleic acid YNB Glucose 0.1 -0.1 -0.5 0.1 0.3
auxotrophy YNB Glucose 0.0 -0.3 0.0 -0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 1.0 -0.5 -0.7 0.6
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.4 -0.4 0.3 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.1 0.6 0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 0.4 -0.7 0.6 0.5
growth on ypd YPD -0.1 0.2 -0.6 0.4 1.0
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.1 0.5 0.0 0.8
auxotrophy Dropout Complete 0.0 -0.4 1.3 -0.4 0.8
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 0.7 0.2 0.5
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.5 0.0 0.6 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.1 0.7 0.3 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.5 1.0 0.5 0.2
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