Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3620: 11988 - K15777 DOPA 4,5-DOPA dioxygenase extradiol, at 181762 to 183020 11988 mRNA_3621: 11989 - K00252 GCDH, gcdH glutaryl-CoA dehydrogenase, at 183204 to 185483 11989 mRNA_3622: 11990 - KOG0254 Predicted transporter (major facilitator superfamily), at 186018 to 188381 11990 mRNA_3623: 11991 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 190258 to 192689 11991 mRNA_3624: 11992 - SUPERFAMILY--SSF52047, at 193379 to 194590 11992
Group Condition mRNA_3620 mRNA_3621 mRNA_3622 mRNA_3623 mRNA_3624
11988
11989
11990
11991
11992
growth on oleic acid YNB Oleic Acid 0.2 -0.2 -1.1 -0.5 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.3 -0.9 -0.1 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.0 -0.1 0.1 -1.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.5 -1.4 -0.3 0.6
growth on oleic acid YNB Glucose 0.2 -0.4 -0.3 -0.2 -0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.4 0.1 -0.1 -0.5
auxotrophy YNB Glucose -0.1 -0.3 0.0 -0.3 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.5 0.1 0.3 -1.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 0.1 0.4 -0.7
growth on ypd YPD -0.2 0.3 -0.1 0.2 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.2 -0.1 0.8 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.2 0.1 0.4 -0.4
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 -0.0 -0.0 0.7
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.1 0.0 -0.1 0.5
auxotrophy Dropout Complete -0.0 -0.1 0.0 -0.4 1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.1 0.2 0.1 0.7
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.2 0.3 1.0 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.3 0.1 -0.1 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.2 -0.0 0.5 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.5 0.3 -0.1 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.0 0.2 0.5 1.0
remove
mRNA_3620
plot
remove
mRNA_3621
plot
remove
mRNA_3622
remove
mRNA_3623
plot
remove
mRNA_3624
plot