Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3616: 11984 - K11600 RRP41, EXOSC4, SKI6 exosome complex component RRP41, at 173211 to 174376 11984 mRNA_3617: 11985 - KOG0254 Predicted transporter (major facilitator superfamily), at 175125 to 177580 11985 mRNA_3618: 11986 - HMMPfam-Cupin domain-PF07883,SUPERFAMILY--SSF51182, at 178257 to 178945 11986 mRNA_3619: 11987 - HMMPfam-X-Pro dipeptidyl-peptidase (S15 family)-PF02129,HMMPfam-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-PF08530,SMART-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-SM00939,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF53474,TIGRFAM-/NonD hydrolase CocE/NonD family protein-TIGR00976, at 179234 to 181455 11987 mRNA_3620: 11988 - K15777 DOPA 4,5-DOPA dioxygenase extradiol, at 181762 to 183020 11988
Group Condition mRNA_3616 mRNA_3617 mRNA_3618 mRNA_3619 mRNA_3620
11984
11985
11986
11987
11988
facs on lipid accumulation Sorted Low BODIPY Gate   -0.1 -0.1 -0.9 -0.3
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 0.1 -0.0 -0.3
growth on oleic acid YNB Glucose   -0.1 -0.1 -0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate   0.5 -0.0 -0.2 -0.3
growth on ypd YPD   -0.3 0.5 -0.0 -0.2
auxotrophy Dropout Complete   0.3 0.1 -0.5 -0.0
auxotrophy YNB Glucose   0.5 0.1 -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine   0.6 0.1 -0.8 0.2
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.2 0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.2 0.5 -0.4 0.3
ypd buoyancy 40 hrs Low Buoyancy   0.2 -0.1 -0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.4 0.5 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.1 0.5 -0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy   0.1 0.0 0.3 -0.0
growth on oleic acid YNB Oleic Acid   0.4 -0.3 0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1 0.3 0.3 0.1
auxotrophy YNB Glucose 75mM Arginine   0.8 0.2 -0.4 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2 0.6 -0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid   -0.2 0.4 0.4 0.2
growth on ricinoleic acid YNB Glucose   -0.0 0.5 0.7 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   0.7 -0.4 1.1 0.3
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