Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3601: 11969 - K11367 CHD1 chromodomain-helicase-DNA-binding protein 1, at 143237 to 148837 11969 mRNA_3602: 11970 - K10839 RAD23, HR23 UV excision repair protein RAD23, at 149343 to 150921 11970 mRNA_3603: 11971 - K13628 iscA, ISCA1 iron-sulfur cluster assembly protein, at 151130 to 151909 11971 mRNA_3604: 11972 - K10950 ERO1L ERO1-like protein alpha, at 152101 to 154380 11972 mRNA_3605: 11973 - K01872 AARS, alaS alanyl-tRNA synthetase, at 154792 to 158003 11973
Group Condition mRNA_3601 mRNA_3602 mRNA_3603 mRNA_3604 mRNA_3605
11969
11970
11971
11972
11973
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.6 -0.8      
growth on ypd YPD -2.9 -0.3      
buoyancy on lipid accumulation 40 hrs High Buoyancy -3.3 0.2      
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 -0.7      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.5 0.1      
growth on oleic acid YNB Glucose -2.3 0.1      
facs on lipid accumulation Sorted High BODIPY Gate -1.8 -0.4      
buoyancy on lipid accumulation 40 hrs Median Buoyancy -2.0 0.5      
growth on ricinoleic acid YNB Glucose -1.0 -0.3      
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.4      
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 0.2      
auxotrophy YNB Glucose -0.6 -0.0      
growth on oleic acid YNB Oleic Acid -0.9 0.3      
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2      
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.3      
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.1      
auxotrophy Dropout Complete -0.0 0.2      
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 -0.3      
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.3      
auxotrophy YNB Glucose 75mM Arginine 0.6 -0.0      
auxotrophy YNB Glucose 75mM Methionine 0.5 0.2      
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