Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3589: 11957 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383, at 116230 to 117801 11957 mRNA_3590: 11958 - K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma, at 118835 to 120315 11958 mRNA_3591: 11959 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 120588 to 122766 11959 mRNA_3592: 11960 - KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50), at 123173 to 125228 11960 mRNA_3593: 11961 - K06978 K06978 uncharacterized protein, at 125373 to 127423 11961
Group Condition mRNA_3589 mRNA_3590 mRNA_3591 mRNA_3592 mRNA_3593
11957
11958
11959
11960
11961
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9   -0.1   -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5   -0.3   -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5   -0.1   -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6   0.0   -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   -0.4   -0.5
growth on ricinoleic acid YNB Glucose -0.2   -0.5   -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2   -0.4   -0.2
auxotrophy YNB Glucose 75mM Arginine 0.2   -0.6   -0.3
auxotrophy YNB Glucose 0.2   -0.4   -0.1
growth on oleic acid YNB Glucose 0.3   -0.3   -0.3
growth on ypd YPD -0.2   -0.3   0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3   -0.1   -0.3
ypd buoyancy 40 hrs High Buoyancy 0.1   -0.1   -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1   -0.2   -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2   -0.2   0.3
growth on oleic acid YNB Oleic Acid 0.5   -0.3   -0.4
auxotrophy YNB Glucose 75mM Methionine 0.6   -0.4   -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4   0.6   0.0
auxotrophy Dropout Complete 0.9   -0.1   -0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.3   0.4   -0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.0   0.5   -0.1
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