Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3588: 11956 - KOG0254 Predicted transporter (major facilitator superfamily), at 113212 to 115744 11956 mRNA_3589: 11957 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383, at 116230 to 117801 11957 mRNA_3590: 11958 - K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma, at 118835 to 120315 11958 mRNA_3591: 11959 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 120588 to 122766 11959 mRNA_3592: 11960 - KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50), at 123173 to 125228 11960
Group Condition mRNA_3588 mRNA_3589 mRNA_3590 mRNA_3591 mRNA_3592
11956
11957
11958
11959
11960
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.9   -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.2   -0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.5   -0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.6   0.0  
growth on ricinoleic acid YNB Glucose 0.3 -0.2   -0.5  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.2   -0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.5   -0.1  
auxotrophy YNB Glucose 75mM Arginine 0.1 0.2   -0.6  
ypd buoyancy 40 hrs High Buoyancy -0.2 0.1   -0.1  
auxotrophy YNB Glucose 0.1 0.2   -0.4  
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.1   -0.2  
growth on ypd YPD 0.3 -0.2   -0.3  
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.3   -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.1   -0.4  
growth on oleic acid YNB Glucose 0.2 0.3   -0.3  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.6   -0.4  
growth on oleic acid YNB Oleic Acid 0.2 0.5   -0.3  
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.0   0.5  
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 -0.4   0.6  
auxotrophy Dropout Complete 0.2 0.9   -0.1  
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.3   0.4  
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