Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3587: 11955 - K12836 U2AF1 splicing factor U2AF 35 kDa subunit, at 111593 to 112967 11955 mRNA_3588: 11956 - KOG0254 Predicted transporter (major facilitator superfamily), at 113212 to 115744 11956 mRNA_3589: 11957 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383, at 116230 to 117801 11957 mRNA_3590: 11958 - K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma, at 118835 to 120315 11958 mRNA_3591: 11959 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 120588 to 122766 11959
Group Condition mRNA_3587 mRNA_3588 mRNA_3589 mRNA_3590 mRNA_3591
11955
11956
11957
11958
11959
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 -0.9   -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   -0.2 -0.2   -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 -0.5   -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 -0.6   0.0
growth on ricinoleic acid YNB Glucose   0.3 -0.2   -0.5
growth on ricinoleic acid YNB Ricinoleic Acid   0.1 -0.2   -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3 -0.5   -0.1
auxotrophy YNB Glucose 75mM Arginine   0.1 0.2   -0.6
ypd buoyancy 40 hrs High Buoyancy   -0.2 0.1   -0.1
auxotrophy YNB Glucose   0.1 0.2   -0.4
ypd buoyancy 40 hrs Median Buoyancy   0.0 0.1   -0.2
growth on ypd YPD   0.3 -0.2   -0.3
ypd buoyancy 40 hrs Low Buoyancy   -0.1 0.3   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   0.4 0.1   -0.4
growth on oleic acid YNB Glucose   0.2 0.3   -0.3
auxotrophy YNB Glucose 75mM Methionine   0.1 0.6   -0.4
growth on oleic acid YNB Oleic Acid   0.2 0.5   -0.3
facs on lipid accumulation Sorted No BODIPY Gate   0.0 0.0   0.5
facs on lipid accumulation Sorted Low BODIPY Gate   0.6 -0.4   0.6
auxotrophy Dropout Complete   0.2 0.9   -0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.3 0.3   0.4
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