Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3585: 11953 - KOG1339 Aspartyl protease, at 106973 to 108703 11953 mRNA_3586: 11954 - HMMPfam-Membrane fusion protein Use1-PF09753, at 110146 to 111411 11954 mRNA_3587: 11955 - K12836 U2AF1 splicing factor U2AF 35 kDa subunit, at 111593 to 112967 11955 mRNA_3588: 11956 - KOG0254 Predicted transporter (major facilitator superfamily), at 113212 to 115744 11956 mRNA_3589: 11957 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383, at 116230 to 117801 11957
Group Condition mRNA_3585 mRNA_3586 mRNA_3587 mRNA_3588 mRNA_3589
11953
11954
11955
11956
11957
ypd buoyancy 40 hrs High Buoyancy -0.4     -0.2 0.1
growth on ypd YPD -0.6     0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.2     -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1     0.1 -0.2
growth on ricinoleic acid YNB Glucose 0.1     0.3 -0.2
growth on oleic acid YNB Glucose -0.2     0.2 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.8     0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.3     0.0 0.0
auxotrophy Dropout Complete -0.7     0.2 0.9
auxotrophy YNB Glucose 0.2     0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2     -0.1 0.3
growth on oleic acid YNB Oleic Acid -0.3     0.2 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.2     0.1 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.8     0.3 -0.5
ypd buoyancy 40 hrs Median Buoyancy 0.5     0.0 0.1
auxotrophy YNB Glucose 75mM Arginine 0.5     0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.2     0.3 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.2     0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine 0.2     0.1 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 1.0     0.4 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 1.3     0.6 -0.4
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