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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3581: 11949 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 97924 to 100153
11949
mRNA_3582: 11950 - HMMPfam-Polycystin cation channel-PF08016, at 100447 to 103297
11950
mRNA_3583: 11951 - Hypothetical Protein, at 104086 to 104307
11951
mRNA_3584: 11952 - K00122 FDH formate dehydrogenase, at 104607 to 106241
11952
mRNA_3585: 11953 - KOG1339 Aspartyl protease, at 106973 to 108703
11953
Group
Condition
mRNA_3581
mRNA_3582
mRNA_3583
mRNA_3584
mRNA_3585
11949
11950
11951
11952
11953
growth on ypd
YPD
-0.2
-0.1
0.3
-0.6
ypd buoyancy
40 hrs High Buoyancy
0.0
0.0
-0.1
-0.4
auxotrophy
Dropout Complete
0.1
0.1
0.1
-0.7
growth on oleic acid
YNB Oleic Acid
0.1
0.0
0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.0
-0.1
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.1
-0.1
0.2
growth on oleic acid
YNB Glucose
-0.0
0.2
0.3
-0.2
auxotrophy
YNB Glucose
0.1
0.1
-0.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.1
0.6
0.2
growth on ricinoleic acid
YNB Glucose
0.1
0.4
0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.2
0.1
0.5
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.2
0.3
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.3
0.3
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.0
0.2
0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.1
0.4
0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.1
-0.1
1.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.6
0.5
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.3
0.1
1.0
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.3
0.3
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
0.3
0.1
1.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.2
0.7
1.2
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