Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3579: 11947 - K16570 TUBGCP3, GCP3 gamma-tubulin complex component 3, at 93870 to 96029 11947 mRNA_3580: 11948 - KOG0715 Molecular chaperone (DnaJ superfamily), at 97177 to 97844 11948 mRNA_3581: 11949 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 97924 to 100153 11949 mRNA_3582: 11950 - HMMPfam-Polycystin cation channel-PF08016, at 100447 to 103297 11950 mRNA_3583: 11951 - Hypothetical Protein, at 104086 to 104307 11951
Group Condition mRNA_3579 mRNA_3580 mRNA_3581 mRNA_3582 mRNA_3583
11947
11948
11949
11950
11951
ypd buoyancy 40 hrs No Buoyancy Separation   -2.4 -0.0 0.1  
facs on lipid accumulation Sorted High BODIPY Gate   -1.2 -0.0 -0.1  
growth on ypd YPD   -0.8 -0.2 -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid   -1.3 0.3 0.3  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.9 -0.1 0.3  
facs on lipid accumulation Sorted Low BODIPY Gate   -0.5 -0.0 0.3  
ypd buoyancy 40 hrs High Buoyancy   -0.2 0.0 0.0  
ypd buoyancy 40 hrs Low Buoyancy   -0.2 0.1 -0.0  
growth on oleic acid YNB Oleic Acid   -0.0 0.1 0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.3 0.3 0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2 0.2 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.2 0.2 -0.0  
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 -0.1 0.6  
growth on oleic acid YNB Glucose   0.2 -0.0 0.2  
growth on ricinoleic acid YNB Glucose   -0.1 0.1 0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.6 0.1 -0.1  
ypd buoyancy 40 hrs Median Buoyancy   0.2 0.3 0.3  
auxotrophy Dropout Complete   0.6 0.1 0.1  
auxotrophy YNB Glucose 75mM Arginine   1.0 -0.0 0.2  
auxotrophy YNB Glucose   1.3 0.1 0.1  
auxotrophy YNB Glucose 75mM Methionine   1.4 0.1 0.2  
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