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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3574: 11942 - ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 84191 to 85564
11942
mRNA_3575: 11943 - Hypothetical Protein, at 86235 to 86923
11943
mRNA_3576: 11944 - Hypothetical Protein, at 87392 to 87994
11944
mRNA_3577: 11945 - K04567 KARS, lysS lysyl-tRNA synthetase, class II, at 88992 to 92589
11945
mRNA_3578: 11946 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 92960 to 93719
11946
Group
Condition
mRNA_3574
mRNA_3575
mRNA_3576
mRNA_3577
mRNA_3578
11942
11943
11944
11945
11946
growth on oleic acid
YNB Glucose
0.1
-0.7
-0.5
growth on oleic acid
YNB Oleic Acid
-0.0
-0.4
-0.4
auxotrophy
YNB Glucose
0.0
-0.5
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.0
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.2
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.1
-0.1
auxotrophy
Dropout Complete
-0.4
-0.4
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.3
0.1
growth on ricinoleic acid
YNB Glucose
-0.4
0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.4
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.6
0.5
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.2
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.6
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.5
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
0.7
0.3
growth on ypd
YPD
0.5
-0.5
0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.5
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
0.6
-0.0
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