Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3570: 11938 - HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630, at 75276 to 76903 11938 mRNA_3571: 11939 - K03681 RRP40, EXOSC3 exosome complex component RRP40, at 77591 to 78625 11939 mRNA_3572: 11940 - K11314 TADA2A, ADA2 transcriptional adapter 2-alpha, at 79105 to 81061 11940 mRNA_3573: 11941 - SUPERFAMILY--SSF54928, at 81058 to 83632 11941 mRNA_3574: 11942 - ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 84191 to 85564 11942
Group Condition mRNA_3570 mRNA_3571 mRNA_3572 mRNA_3573 mRNA_3574
11938
11939
11940
11941
11942
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6     -0.3 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.8     -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5     0.0 -0.1
growth on ricinoleic acid YNB Glucose 0.1     -0.3 -0.4
growth on oleic acid YNB Glucose -0.5     -0.1 0.1
auxotrophy Dropout Complete -0.1     0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.7     -0.2 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1     0.0 -0.4
growth on oleic acid YNB Oleic Acid -0.2     -0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4     0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1     0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2     0.1 0.1
auxotrophy YNB Glucose 75mM Methionine -0.2     0.2 -0.0
auxotrophy YNB Glucose 0.0     -0.1 0.0
auxotrophy YNB Glucose 75mM Arginine -0.2     0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3     0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1     -0.2 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1     -0.1 0.4
ypd buoyancy 40 hrs High Buoyancy 0.1     0.2 0.2
growth on ypd YPD 0.1     -0.0 0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.0     0.3 0.3
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