Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3564: 11932 - Hypothetical Protein, at 63584 to 64390 11932 mRNA_3565: 11933 - KOG0254 Predicted transporter (major facilitator superfamily), at 64818 to 67834 11933 mRNA_3566: 11934 - HMMPfam-Opioid growth factor receptor (OGFr) conserved region-PF04664, at 68325 to 69478 11934 mRNA_3567: 11935 - KOG1760 Molecular chaperone Prefoldin, subunit 4, at 70046 to 70788 11935 mRNA_3568: 11936 - KOG4055 Uncharacterized conserved protein, at 70969 to 72030 11936
Group Condition mRNA_3564 mRNA_3565 mRNA_3566 mRNA_3567 mRNA_3568
11932
11933
11934
11935
11936
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -1.7 0.4    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -1.3 0.1    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -1.2 0.2    
growth on ypd YPD -0.1 0.2 -0.3    
growth on oleic acid YNB Glucose 0.0 -0.4 0.1    
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.1 -0.1    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.7 0.2    
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.2 -0.4    
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.2 -0.4    
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.0 -0.1    
growth on oleic acid YNB Oleic Acid 0.1 -0.5 0.2    
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.3 0.1    
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.3 0.1    
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.0 -0.1    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.2 0.2    
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.2 0.1    
auxotrophy Dropout Complete 0.1 -0.1 0.2    
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.0 0.1    
growth on ricinoleic acid YNB Glucose 0.0 0.1 0.1    
auxotrophy YNB Glucose -0.0 -0.0 0.4    
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.0 0.3    
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