Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3561: 11929 - K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1, at 53453 to 55273 11929 mRNA_3562: 11930 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 59099 to 59542 11930 mRNA_3563: 11931 - Hypothetical Protein, at 61951 to 62967 11931 mRNA_3564: 11932 - Hypothetical Protein, at 63584 to 64390 11932 mRNA_3565: 11933 - KOG0254 Predicted transporter (major facilitator superfamily), at 64818 to 67834 11933
Group Condition mRNA_3561 mRNA_3562 mRNA_3563 mRNA_3564 mRNA_3565
11929
11930
11931
11932
11933
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.5 0.1 0.1 -1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3 0.0 0.2 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.6 0.0 0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.0 0.1 0.4 -1.2
growth on ricinoleic acid YNB Ricinoleic Acid   -0.2 -0.3 0.1 -0.0
growth on oleic acid YNB Oleic Acid   0.1 -0.1 0.1 -0.5
growth on oleic acid YNB Glucose   0.1 -0.1 0.0 -0.4
growth on ricinoleic acid YNB Glucose   -0.3 -0.0 0.0 0.1
auxotrophy YNB Glucose 75mM Methionine   0.0 -0.0 0.1 -0.3
growth on ypd YPD   0.3 -0.2 -0.1 0.2
auxotrophy YNB Glucose   -0.0 0.2 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3 0.3 0.2 -0.7
auxotrophy YNB Glucose 75mM Arginine   0.1 0.2 0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.7 -0.2 0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy   0.2 0.1 0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate   0.6 -0.3 0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy   0.2 0.1 0.0 0.2
ypd buoyancy 40 hrs High Buoyancy   0.2 0.2 0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate   0.6 -0.2 0.3 0.0
auxotrophy Dropout Complete   0.6 0.3 0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   1.4 0.4 0.1 0.2
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