Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3560: 11928 - K06101 ASH1L histone-lysine N-methyltransferase ASH1L, at 49471 to 51932 11928 mRNA_3561: 11929 - K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1, at 53453 to 55273 11929 mRNA_3562: 11930 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 59099 to 59542 11930 mRNA_3563: 11931 - Hypothetical Protein, at 61951 to 62967 11931 mRNA_3564: 11932 - Hypothetical Protein, at 63584 to 64390 11932
Group Condition mRNA_3560 mRNA_3561 mRNA_3562 mRNA_3563 mRNA_3564
11928
11929
11930
11931
11932
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   -0.6 0.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1   -0.2 -0.3 0.1
growth on ypd YPD -0.4   0.3 -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.1   -0.3 -0.0 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0   -0.5 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine 0.0   0.0 -0.0 0.1
growth on oleic acid YNB Glucose 0.1   0.1 -0.1 0.0
auxotrophy YNB Glucose 0.1   -0.0 0.2 -0.0
growth on oleic acid YNB Oleic Acid 0.2   0.1 -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0   0.2 0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1   0.2 0.1 0.0
auxotrophy YNB Glucose 75mM Arginine 0.1   0.1 0.2 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5   0.3 0.3 0.2
ypd buoyancy 40 hrs High Buoyancy -0.1   0.2 0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0   0.7 -0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2   0.0 0.1 0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.0   0.6 -0.2 0.3
auxotrophy Dropout Complete -0.2   0.6 0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.4   0.6 -0.3 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5   0.3 0.0 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.0   1.4 0.4 0.1
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