Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3559: 11927 - K18622 ADD adducin, at 47596 to 49033 11927 mRNA_3560: 11928 - K06101 ASH1L histone-lysine N-methyltransferase ASH1L, at 49471 to 51932 11928 mRNA_3561: 11929 - K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1, at 53453 to 55273 11929 mRNA_3562: 11930 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 59099 to 59542 11930 mRNA_3563: 11931 - Hypothetical Protein, at 61951 to 62967 11931
Group Condition mRNA_3559 mRNA_3560 mRNA_3561 mRNA_3562 mRNA_3563
11927
11928
11929
11930
11931
growth on ricinoleic acid YNB Methylricinoleic Acid -1.2 -0.1   -0.6 0.0
growth on ricinoleic acid YNB Glucose -0.2 -0.1   -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.9 -0.1   0.2 0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 0.0   0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.1   -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.8 0.1   0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 0.0   0.2 0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 0.1   0.1 0.2
auxotrophy YNB Glucose 0.1 0.1   -0.0 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.0   0.7 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.9 0.0   -0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 -0.5   0.3 0.3
growth on oleic acid YNB Oleic Acid 0.7 0.2   0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 0.2   0.0 0.1
growth on oleic acid YNB Glucose 0.9 0.1   0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 0.0   0.6 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.0   1.4 0.4
auxotrophy Dropout Complete 0.5 -0.2   0.6 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.8 0.4   0.6 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.8 0.5   0.3 0.0
growth on ypd YPD 2.3 -0.4   0.3 -0.2
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