Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3558: 11926 - K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10, at 44062 to 47314 11926 mRNA_3559: 11927 - K18622 ADD adducin, at 47596 to 49033 11927 mRNA_3560: 11928 - K06101 ASH1L histone-lysine N-methyltransferase ASH1L, at 49471 to 51932 11928 mRNA_3561: 11929 - K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1, at 53453 to 55273 11929 mRNA_3562: 11930 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 59099 to 59542 11930
Group Condition mRNA_3558 mRNA_3559 mRNA_3560 mRNA_3561 mRNA_3562
11926
11927
11928
11929
11930
growth on ricinoleic acid YNB Glucose -3.6 -0.2 -0.1   -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -2.1 -1.2 -0.1   -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -3.4 0.2 -0.1   -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -3.2 0.7 0.0   0.6
auxotrophy YNB Glucose 75mM Methionine -1.2 -0.6 0.0   0.0
ypd buoyancy 40 hrs High Buoyancy -0.8 -0.9 -0.1   0.2
auxotrophy YNB Glucose 75mM Arginine -1.4 -0.2 0.1   0.1
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.8 0.1   0.2
ypd buoyancy 40 hrs Median Buoyancy -0.7 -0.4 0.0   0.2
growth on oleic acid YNB Glucose -1.8 0.9 0.1   0.1
auxotrophy YNB Glucose -0.6 0.1 0.1   -0.0
facs on lipid accumulation Sorted No BODIPY Gate -2.1 0.8 0.4   0.6
growth on oleic acid YNB Oleic Acid -1.1 0.7 0.2   0.1
auxotrophy Dropout Complete -1.0 0.5 -0.2   0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.9 0.0   -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.6 -0.5   0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.0 -0.0   0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.5 0.2   0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.8 0.5   0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 -0.7 0.0   1.4
growth on ypd YPD -0.5 2.3 -0.4   0.3
remove
mRNA_3558
plot		 remove
mRNA_3559
plot		 remove
mRNA_3560		 remove
mRNA_3561
plot		 remove
mRNA_3562
plot