Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3556: 11924 - KOG0254 Predicted transporter (major facilitator superfamily), at 38444 to 40817 11924 mRNA_3557: 11925 - K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase, at 41446 to 43898 11925 mRNA_3558: 11926 - K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10, at 44062 to 47314 11926 mRNA_3559: 11927 - K18622 ADD adducin, at 47596 to 49033 11927 mRNA_3560: 11928 - K06101 ASH1L histone-lysine N-methyltransferase ASH1L, at 49471 to 51932 11928
Group Condition mRNA_3556 mRNA_3557 mRNA_3558 mRNA_3559 mRNA_3560
11924
11925
11926
11927
11928
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -3.6 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.1 -3.4 0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 0.1 -2.1 -1.2 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1 -0.8 -0.9 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 -1.4 -0.2 0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 0.4 -1.2 -0.6 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2 -0.5 -0.8 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.7 -0.4 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.6 0.2 0.0 -0.0
growth on oleic acid YNB Glucose -0.2 -0.1 -1.8 0.9 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.5 -0.2 -2.1 0.8 0.4
facs on lipid accumulation Sorted Low BODIPY Gate 2.1 -0.2 -3.2 0.7 0.0
auxotrophy Dropout Complete -0.2 0.3 -1.0 0.5 -0.2
growth on oleic acid YNB Oleic Acid -0.5 0.2 -1.1 0.7 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.2 0.7 -0.7 0.0
auxotrophy YNB Glucose 0.0 0.2 -0.6 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.7 -0.3 0.6 -0.5
growth on ypd YPD -0.1 0.2 -0.5 2.3 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.6 -0.4 0.9 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.6 0.3 0.5 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.6 -0.2 0.8 0.5
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