Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3554: 11922 - KOG0254 Predicted transporter (major facilitator superfamily), at 36108 to 36965 11922 mRNA_3555: 11923 - Hypothetical Protein, at 37536 to 38312 11923 mRNA_3556: 11924 - KOG0254 Predicted transporter (major facilitator superfamily), at 38444 to 40817 11924 mRNA_3557: 11925 - K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase, at 41446 to 43898 11925 mRNA_3558: 11926 - K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10, at 44062 to 47314 11926
Group Condition mRNA_3554 mRNA_3555 mRNA_3556 mRNA_3557 mRNA_3558
11922
11923
11924
11925
11926
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.2 -0.7 -0.1 -3.4
growth on ricinoleic acid YNB Glucose 0.3 0.1 -0.1 -0.2 -3.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.1 -0.7 0.1 -2.1
growth on oleic acid YNB Glucose 0.3 -0.1 -0.2 -0.1 -1.8
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 -0.7 -0.6 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.1 0.5 -0.2 -2.1
growth on oleic acid YNB Oleic Acid 0.0 0.1 -0.5 0.2 -1.1
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1 -0.1 0.2 -1.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.0 2.1 -0.2 -3.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.1 -0.0 -0.1 -0.7
growth on ypd YPD -0.3 -0.1 -0.1 0.2 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 0.0 -0.1 -0.8
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0 0.1 -0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1 -0.0 0.4 -1.2
auxotrophy Dropout Complete 0.6 0.1 -0.2 0.3 -1.0
auxotrophy YNB Glucose 0.1 0.1 0.0 0.2 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.2 0.1 -0.2 0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 0.0 0.2 0.7 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.1 0.3 0.6 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.0 0.2 0.6 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.0 0.4 0.6 -0.2
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