Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28216 to 30545 11919 mRNA_3552: 11920 - K10884 XRCC6, KU70, G22P1 ATP-dependent DNA helicase 2 subunit 1, at 30770 to 33816 11920 mRNA_3553: 11921 - Hypothetical Protein, at 34390 to 35973 11921 mRNA_3554: 11922 - KOG0254 Predicted transporter (major facilitator superfamily), at 36108 to 36965 11922 mRNA_3555: 11923 - Hypothetical Protein, at 37536 to 38312 11923
Group Condition mRNA_3551 mRNA_3552 mRNA_3553 mRNA_3554 mRNA_3555
11919
11920
11921
11922
11923
growth on ypd YPD -0.2 -0.3 -0.7 -0.3 -0.1
growth on oleic acid YNB Glucose -0.2 -0.0 -0.8 0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 -0.1 -0.2 0.1
growth on oleic acid YNB Oleic Acid -0.4 -0.1 -0.1 0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.4 0.1 -0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.4 0.2 0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.0 0.5 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.2 0.2 -0.5 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 0.2 0.4 0.0 0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 0.3 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.1 0.6 -0.5 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.3 -0.0 0.3 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.1 0.1 0.3 0.1
auxotrophy YNB Glucose -0.2 -0.1 0.4 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.1 0.3 -0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.1 0.1 0.2 0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 0.2 -0.0 0.1 -0.0
auxotrophy Dropout Complete -0.3 -0.0 0.1 0.6 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 0.3 -0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.0 0.1 0.3 0.2
growth on ricinoleic acid YNB Glucose 0.0 0.1 0.2 0.3 0.1
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