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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3549: 11917 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 24932 to 26343
11917
mRNA_3550: 11918 - Hypothetical Protein, at 26790 to 27797
11918
mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28216 to 30545
11919
mRNA_3552: 11920 - K10884 XRCC6, KU70, G22P1 ATP-dependent DNA helicase 2 subunit 1, at 30770 to 33816
11920
mRNA_3553: 11921 - Hypothetical Protein, at 34390 to 35973
11921
Group
Condition
mRNA_3549
mRNA_3550
mRNA_3551
mRNA_3552
mRNA_3553
11917
11918
11919
11920
11921
growth on ypd
YPD
-0.4
-0.2
-0.2
-0.3
-0.7
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.6
-0.0
-0.4
0.2
growth on oleic acid
YNB Glucose
0.6
-0.3
-0.2
-0.0
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.4
-0.4
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
-0.3
-0.1
0.3
auxotrophy
Dropout Complete
-0.0
-0.1
-0.3
-0.0
0.1
growth on oleic acid
YNB Oleic Acid
0.4
-0.1
-0.4
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.7
-0.2
0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.4
0.1
-0.3
-0.0
auxotrophy
YNB Glucose
0.0
-0.3
-0.2
-0.1
0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.4
0.0
0.1
0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.3
0.1
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.4
-0.5
0.2
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.3
0.1
0.2
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.1
0.4
-0.4
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
0.2
-0.4
0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.0
0.2
0.1
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
0.2
-0.2
-0.0
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
0.2
0.1
0.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
0.1
-0.0
0.1
0.6
growth on ricinoleic acid
YNB Glucose
0.8
0.4
0.0
0.1
0.2
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