Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3545: 11913 - HMMPfam-SAP domain-PF02037,ProSiteProfiles-SAP motif profile.-PS50800,SMART-Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation-SM00513,SUPERFAMILY--SSF68906, at 16929 to 18162 11913 mRNA_3546: 11914 - HMMPfam-Domain of unknown function (DUF3844)-PF12955, at 18733 to 20553 11914 mRNA_3547: 11915 - K02973 RP-S23e, RPS23 small subunit ribosomal protein S23e, at 21031 to 22475 11915 mRNA_3548: 11916 - K19307 BMT5 25S rRNA (uracil2634-N3)-methyltransferase, at 22720 to 24408 11916 mRNA_3549: 11917 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 24932 to 26343 11917
Group Condition mRNA_3545 mRNA_3546 mRNA_3547 mRNA_3548 mRNA_3549
11913
11914
11915
11916
11917
growth on ypd YPD -0.6 -0.3   0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.4   0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.1   -0.4 0.2
auxotrophy YNB Glucose -0.0 0.1   -0.3 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1   -0.3 0.6
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.4   0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.2   -0.2 0.3
auxotrophy YNB Glucose 75mM Methionine 0.0 0.2   -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.0   0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1   0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.2   0.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.0   0.1 0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.2   0.0 0.6
auxotrophy Dropout Complete 0.2 0.1   0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.4 0.1   0.1 0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.2   0.4 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.3   0.6 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.2   0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.2   0.2 0.4
growth on oleic acid YNB Glucose 0.3 -0.3   0.5 0.6
growth on oleic acid YNB Oleic Acid 0.4 0.1   0.3 0.4
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