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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3541: 11909 - K01754 E4.3.1.19, ilvA, tdcB threonine dehydratase, at 8355 to 10759
11909
mRNA_3542: 11910 - K01597 MVD, mvaD diphosphomevalonate decarboxylase, at 11016 to 12700
11910
mRNA_3543: 11911 - HMMPfam-MAGE family-PF01454, at 12910 to 14656
11911
mRNA_3544: 11912 - K03506 POLE4 DNA polymerase epsilon subunit 4, at 15798 to 16734
11912
mRNA_3545: 11913 - HMMPfam-SAP domain-PF02037,ProSiteProfiles-SAP motif profile.-PS50800,SMART-Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation-SM00513,SUPERFAMILY--SSF68906, at 16929 to 18162
11913
Group
Condition
mRNA_3541
mRNA_3542
mRNA_3543
mRNA_3544
mRNA_3545
11909
11910
11911
11912
11913
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.9
-1.3
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-2.1
-1.4
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-1.4
-0.4
-0.1
growth on oleic acid
YNB Glucose
-1.2
-0.6
0.3
growth on ricinoleic acid
YNB Glucose
-0.5
0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.7
-0.1
0.0
auxotrophy
YNB Glucose 75mM Arginine
-1.0
0.4
0.1
auxotrophy
YNB Glucose
-0.6
0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.3
0.8
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.2
-0.3
growth on ypd
YPD
-0.1
0.3
-0.6
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
0.7
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.2
0.1
auxotrophy
Dropout Complete
-0.2
0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.9
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.3
-0.3
growth on oleic acid
YNB Oleic Acid
-0.6
0.7
0.4
ypd buoyancy
40 hrs High Buoyancy
0.6
0.0
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.9
-0.0
ypd buoyancy
40 hrs Median Buoyancy
1.0
-0.2
0.2
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