Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3541: 11909 - K01754 E4.3.1.19, ilvA, tdcB threonine dehydratase, at 8355 to 10759 11909 mRNA_3542: 11910 - K01597 MVD, mvaD diphosphomevalonate decarboxylase, at 11016 to 12700 11910 mRNA_3543: 11911 - HMMPfam-MAGE family-PF01454, at 12910 to 14656 11911 mRNA_3544: 11912 - K03506 POLE4 DNA polymerase epsilon subunit 4, at 15798 to 16734 11912 mRNA_3545: 11913 - HMMPfam-SAP domain-PF02037,ProSiteProfiles-SAP motif profile.-PS50800,SMART-Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation-SM00513,SUPERFAMILY--SSF68906, at 16929 to 18162 11913
Group Condition mRNA_3541 mRNA_3542 mRNA_3543 mRNA_3544 mRNA_3545
11909
11910
11911
11912
11913
facs on lipid accumulation Sorted Low BODIPY Gate -1.9     -1.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -2.1     -1.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate -1.4     -0.4 -0.1
growth on oleic acid YNB Glucose -1.2     -0.6 0.3
growth on ricinoleic acid YNB Glucose -0.5     0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.7     -0.1 0.0
auxotrophy YNB Glucose 75mM Arginine -1.0     0.4 0.1
auxotrophy YNB Glucose -0.6     0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.3     0.8 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0     -0.2 -0.3
growth on ypd YPD -0.1     0.3 -0.6
ypd buoyancy 40 hrs Low Buoyancy 0.2     -0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6     0.7 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.1     -0.2 0.1
auxotrophy Dropout Complete -0.2     0.1 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3     0.9 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2     0.3 -0.3
growth on oleic acid YNB Oleic Acid -0.6     0.7 0.4
ypd buoyancy 40 hrs High Buoyancy 0.6     0.0 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0     0.9 -0.0
ypd buoyancy 40 hrs Median Buoyancy 1.0     -0.2 0.2
remove
mRNA_3541
plot
remove
mRNA_3542
plot
remove
mRNA_3543
remove
mRNA_3544
plot
remove
mRNA_3545
plot