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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3532: 11900 - K00670 NAA30, MAK3 N-alpha-acetyltransferase 30, at 325882 to 326936
11900
mRNA_3533: 11901 - K08337 ATG7 ubiquitin-like modifier-activating enzyme ATG7, at 327096 to 329991
11901
mRNA_3534: 11902 - Hypothetical Protein, at 330976 to 331488
11902
mRNA_3535: 11903 - HMMPfam-Protein of unknown function (DUF2419)-PF10343, at 331726 to 332711
11903
mRNA_3536: 11904 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 333294 to 333991
11904
Group
Condition
mRNA_3532
mRNA_3533
mRNA_3534
mRNA_3535
mRNA_3536
11900
11901
11902
11903
11904
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.3
-1.0
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-2.4
-0.2
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-3.1
0.4
0.4
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-2.1
0.3
0.4
-0.0
growth on ypd
YPD
0.2
-0.3
0.0
-0.8
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.0
-0.5
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.2
0.1
-0.7
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.1
-0.4
-0.1
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.0
0.4
-0.5
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.5
-0.0
0.2
0.5
growth on ricinoleic acid
YNB Glucose
0.4
-0.1
0.2
0.2
0.2
auxotrophy
Dropout Complete
0.7
0.2
0.1
-0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.5
0.1
0.7
-0.5
0.2
growth on oleic acid
YNB Glucose
0.6
0.6
0.0
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.0
0.6
-0.1
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.8
-0.2
0.1
-0.2
0.5
auxotrophy
YNB Glucose
0.7
0.2
0.5
-0.1
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
0.7
0.1
0.0
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
1.4
0.4
0.4
-0.8
0.4
growth on oleic acid
YNB Oleic Acid
1.3
0.7
0.0
-0.2
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
1.2
0.3
0.5
0.6
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