Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3520: 11888 - BLAST mannose-6-phosphate isomerase, class I [Kwoniella..., at 299800 to 300733 11888 mRNA_3521: 11889 - K02900 RP-L27Ae, RPL27A large subunit ribosomal protein L27Ae, at 302044 to 303082 11889 mRNA_3522: 11890 - K03008 RPB11, POLR2J DNA-directed RNA polymerase II subunit RPB11, at 303792 to 304536 11890 mRNA_3523: 11891 - K08064 NFYA nuclear transcription factor Y, alpha, at 304900 to 306087 11891 mRNA_3524: 11892 - Hypothetical Protein, at 306520 to 307367 11892
Group Condition mRNA_3520 mRNA_3521 mRNA_3522 mRNA_3523 mRNA_3524
11888
11889
11890
11891
11892
ypd buoyancy 40 hrs No Buoyancy Separation -1.0     -0.9 0.1
growth on oleic acid YNB Oleic Acid -1.0     -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -1.2     -0.4 0.2
growth on oleic acid YNB Glucose -1.3     0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7     -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.1     -2.0 0.1
auxotrophy YNB Glucose 75mM Arginine -0.8     -0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1     -0.9 0.2
growth on ricinoleic acid YNB Glucose -0.8     0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1     -0.2 -0.1
auxotrophy Dropout Complete -0.0     -0.2 0.2
auxotrophy YNB Glucose 75mM Methionine -0.5     0.4 -0.0
auxotrophy YNB Glucose 0.0     -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.0     -0.0 0.1
growth on ypd YPD 0.3     -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2     -0.3 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5     -0.5 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.4     0.3 0.2
ypd buoyancy 40 hrs High Buoyancy 1.0     0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.0     0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.7     2.0 -0.1
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