Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3519: 11887 - KOG4686 Predicted sugar transporter, at 297438 to 299524 11887 mRNA_3520: 11888 - BLAST mannose-6-phosphate isomerase, class I [Kwoniella..., at 299800 to 300733 11888 mRNA_3521: 11889 - K02900 RP-L27Ae, RPL27A large subunit ribosomal protein L27Ae, at 302044 to 303082 11889 mRNA_3522: 11890 - K03008 RPB11, POLR2J DNA-directed RNA polymerase II subunit RPB11, at 303792 to 304536 11890 mRNA_3523: 11891 - K08064 NFYA nuclear transcription factor Y, alpha, at 304900 to 306087 11891
Group Condition mRNA_3519 mRNA_3520 mRNA_3521 mRNA_3522 mRNA_3523
11887
11888
11889
11890
11891
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -1.0     -0.9
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -1.2     -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.7     -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 1.1     -2.0
growth on oleic acid YNB Oleic Acid 0.2 -1.0     -0.2
growth on ricinoleic acid YNB Glucose -0.3 -0.8     0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.1     -0.9
growth on oleic acid YNB Glucose 0.4 -1.3     0.3
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.8     -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.1     -0.2
auxotrophy Dropout Complete 0.1 -0.0     -0.2
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.5     0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.2     -0.3
auxotrophy YNB Glucose 0.2 0.0     -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.5     -0.5
growth on ypd YPD 0.1 0.3     -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.0     -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.4     0.3
ypd buoyancy 40 hrs High Buoyancy 0.1 1.0     0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 1.0     0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.7     2.0
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