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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3516: 11884 - K01466 allB allantoinase, at 288576 to 290377
11884
mRNA_3517: 11885 - K06677 YCS4, CNAP1, CAPD2 condensin complex subunit 1, at 290580 to 295754
11885
mRNA_3518: 11886 - K12275 SEC62 translocation protein SEC62, at 295819 to 296849
11886
mRNA_3519: 11887 - KOG4686 Predicted sugar transporter, at 297438 to 299524
11887
mRNA_3520: 11888 - BLAST mannose-6-phosphate isomerase, class I [Kwoniella..., at 299800 to 300733
11888
Group
Condition
mRNA_3516
mRNA_3517
mRNA_3518
mRNA_3519
mRNA_3520
11884
11885
11886
11887
11888
growth on oleic acid
YNB Glucose
0.2
0.4
-1.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
0.1
-1.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
-0.5
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
0.7
-0.3
-1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.0
0.1
growth on ricinoleic acid
YNB Glucose
1.0
-0.3
-0.8
growth on oleic acid
YNB Oleic Acid
0.8
0.2
-1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
1.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
1.4
0.0
-0.5
growth on ypd
YPD
0.5
0.1
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.2
0.5
ypd buoyancy
40 hrs Low Buoyancy
1.0
-0.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
0.0
1.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
0.3
0.4
auxotrophy
YNB Glucose 75mM Arginine
1.7
0.3
-0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
0.2
0.7
auxotrophy
Dropout Complete
1.2
0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
1.1
0.3
0.0
auxotrophy
YNB Glucose
1.5
0.2
0.0
ypd buoyancy
40 hrs High Buoyancy
1.6
0.1
1.0
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