Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3516: 11884 - K01466 allB allantoinase, at 288576 to 290377 11884 mRNA_3517: 11885 - K06677 YCS4, CNAP1, CAPD2 condensin complex subunit 1, at 290580 to 295754 11885 mRNA_3518: 11886 - K12275 SEC62 translocation protein SEC62, at 295819 to 296849 11886 mRNA_3519: 11887 - KOG4686 Predicted sugar transporter, at 297438 to 299524 11887 mRNA_3520: 11888 - BLAST mannose-6-phosphate isomerase, class I [Kwoniella..., at 299800 to 300733 11888
Group Condition mRNA_3516 mRNA_3517 mRNA_3518 mRNA_3519 mRNA_3520
11884
11885
11886
11887
11888
growth on oleic acid YNB Glucose 0.2     0.4 -1.3
facs on lipid accumulation Sorted High BODIPY Gate 0.5     0.1 -1.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6     -0.5 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation 0.7     -0.3 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5     -0.0 0.1
growth on ricinoleic acid YNB Glucose 1.0     -0.3 -0.8
growth on oleic acid YNB Oleic Acid 0.8     0.2 -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2     -0.1 1.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.6     0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 1.4     0.0 -0.5
growth on ypd YPD 0.5     0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2     0.2 0.5
ypd buoyancy 40 hrs Low Buoyancy 1.0     -0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0     0.0 1.0
facs on lipid accumulation Sorted No BODIPY Gate 0.5     0.3 0.4
auxotrophy YNB Glucose 75mM Arginine 1.7     0.3 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate 0.3     0.2 0.7
auxotrophy Dropout Complete 1.2     0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy 1.1     0.3 0.0
auxotrophy YNB Glucose 1.5     0.2 0.0
ypd buoyancy 40 hrs High Buoyancy 1.6     0.1 1.0
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