Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3512: 11880 - K10873 RAD52 DNA repair and recombination protein RAD52, at 274074 to 276108 11880 mRNA_3513: 11881 - K11718 HUGT UDP-glucose-glycoprotein glucosyltransferase, at 277755 to 283906 11881 mRNA_3514: 11882 - K18097 GCY1 glycerol 2-dehydrogenase (NADP+), at 284117 to 285391 11882 mRNA_3515: 11883 - K01277 DPP3 dipeptidyl-peptidase III, at 285817 to 288339 11883 mRNA_3516: 11884 - K01466 allB allantoinase, at 288576 to 290377 11884
Group Condition mRNA_3512 mRNA_3513 mRNA_3514 mRNA_3515 mRNA_3516
11880
11881
11882
11883
11884
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.1 -0.1 -0.8 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.3 -0.1 -1.6 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.1 0.1 -0.7 -0.2
growth on ypd YPD 0.0 -0.1 0.1 -0.9 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.3 0.2 -0.3 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 0.1 -0.0 -0.4 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.3 -0.0 0.2 0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.2 0.2 -0.1 0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.1 0.5 -0.4 0.6
growth on oleic acid YNB Glucose 0.0 0.0 0.6 0.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 0.8 0.1 0.6
growth on ricinoleic acid YNB Glucose 0.0 -0.2 0.3 -0.0 1.0
growth on oleic acid YNB Oleic Acid 0.1 0.1 0.7 -0.4 0.8
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.1 0.5 0.0 0.7
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.2 -0.0 0.4 1.1
auxotrophy YNB Glucose -0.1 -0.1 0.3 -0.1 1.5
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 0.1 0.1 1.7
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.1 0.0 0.3 1.0
auxotrophy Dropout Complete -0.3 -0.0 0.3 0.5 1.2
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 0.5 0.1 1.4
ypd buoyancy 40 hrs High Buoyancy 0.2 0.2 0.1 -0.1 1.6
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