Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3511: 11879 - K10875 RAD54L, RAD54 DNA repair and recombination protein RAD54 and RAD54-like protein, at 270571 to 274030 11879 mRNA_3512: 11880 - K10873 RAD52 DNA repair and recombination protein RAD52, at 274074 to 276108 11880 mRNA_3513: 11881 - K11718 HUGT UDP-glucose-glycoprotein glucosyltransferase, at 277755 to 283906 11881 mRNA_3514: 11882 - K18097 GCY1 glycerol 2-dehydrogenase (NADP+), at 284117 to 285391 11882 mRNA_3515: 11883 - K01277 DPP3 dipeptidyl-peptidase III, at 285817 to 288339 11883
Group Condition mRNA_3511 mRNA_3512 mRNA_3513 mRNA_3514 mRNA_3515
11879
11880
11881
11882
11883
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.8 -0.2 0.1 -0.1 -0.8
growth on ypd YPD -0.9 0.0 -0.1 0.1 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.3 0.1 -0.3 0.2 -0.3
growth on oleic acid YNB Oleic Acid -1.6 0.1 0.1 0.7 -0.4
ypd buoyancy 40 hrs High Buoyancy -1.6 0.2 0.2 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 0.4 -0.1 0.1 -0.7
growth on oleic acid YNB Glucose -1.4 0.0 0.0 0.6 0.0
auxotrophy YNB Glucose 75mM Methionine -1.1 -0.2 -0.1 0.5 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 0.3 -0.1 0.5 0.0
auxotrophy Dropout Complete -1.1 -0.3 -0.0 0.3 0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 0.0 0.3 -0.1 -1.6
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.3 -0.1 0.1 0.1
growth on ricinoleic acid YNB Glucose -0.5 0.0 -0.2 0.3 -0.0
auxotrophy YNB Glucose -0.5 -0.1 -0.1 0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 0.2 -0.2 -0.0 0.4
ypd buoyancy 40 hrs Low Buoyancy -0.8 0.2 0.1 0.0 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.3 0.2 0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.6 0.1 -0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.1 -0.1 0.5 -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.7 -0.0 -0.3 -0.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.3 -0.1 0.8 0.1
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