Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3505: 11873 - KOG3699 Cytoskeletal protein Adducin, at 257806 to 259201 11873 mRNA_3506: 11874 - HMMPfam-Asp/Glu/Hydantoin racemase-PF01177, at 259634 to 260419 11874 mRNA_3507: 11875 - K12251 aguB N-carbamoylputrescine amidase, at 260634 to 261961 11875 mRNA_3508: 11876 - K00273 DAO, aao D-amino-acid oxidase, at 262160 to 263731 11876 mRNA_3509: 11877 - K01464 DPYS, dht, hydA dihydropyrimidinase, at 263913 to 265913 11877
Group Condition mRNA_3505 mRNA_3506 mRNA_3507 mRNA_3508 mRNA_3509
11873
11874
11875
11876
11877
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -3.5 -0.2 -0.3 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.5 -0.2 -0.3 -0.5
growth on oleic acid YNB Oleic Acid -0.2 -0.3 -0.1 -0.2 -0.0
growth on oleic acid YNB Glucose -0.0 -0.3 -0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.5 0.2 -0.1 -0.6
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.1 0.0 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.5 0.1 0.1 0.1
auxotrophy Dropout Complete 0.1 -0.3 0.0 -0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.4 -0.4 0.1 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.5 -0.0 0.0 -0.1 -0.4
growth on ypd YPD -0.2 0.4 -0.1 0.4 -0.5
auxotrophy YNB Glucose 0.3 -0.1 0.0 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.4 -0.1 0.1 0.0
ypd buoyancy 40 hrs High Buoyancy 0.3 0.0 -0.1 0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.1 0.1 0.3 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.1 0.2 -0.1 -0.0
growth on ricinoleic acid YNB Glucose 0.5 -0.3 0.2 -0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 0.0 0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.1 -0.1 0.2 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.6 0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.8 0.2 -0.1 -0.2
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