Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3502: 11870 - Hypothetical Protein, at 250882 to 251460 11870 mRNA_3503: 11871 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 251865 to 254204 11871 mRNA_3504: 11872 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 255381 to 257476 11872 mRNA_3505: 11873 - KOG3699 Cytoskeletal protein Adducin, at 257806 to 259201 11873 mRNA_3506: 11874 - HMMPfam-Asp/Glu/Hydantoin racemase-PF01177, at 259634 to 260419 11874
Group Condition mRNA_3502 mRNA_3503 mRNA_3504 mRNA_3505 mRNA_3506
11870
11871
11872
11873
11874
ypd buoyancy 40 hrs No Buoyancy Separation   -0.2 -0.2 -0.1 -3.5
facs on lipid accumulation Sorted High BODIPY Gate   -0.0 -0.1 0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate   0.1 -0.2 0.1 -0.5
growth on ypd YPD   -0.5 0.1 -0.2 0.4
growth on oleic acid YNB Oleic Acid   0.3 0.2 -0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate   0.0 -0.2 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy   -0.0 -0.0 0.2 -0.1
growth on oleic acid YNB Glucose   0.4 0.1 -0.0 -0.3
auxotrophy Dropout Complete   0.2 0.2 0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy   0.0 0.2 0.4 -0.4
growth on ricinoleic acid YNB Glucose   0.1 0.0 0.5 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   0.0 0.3 0.4 -0.4
ypd buoyancy 40 hrs High Buoyancy   -0.1 0.1 0.3 0.0
growth on ricinoleic acid YNB Ricinoleic Acid   0.2 0.1 0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.2 0.4 -0.3 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1 0.3 0.4 0.1
auxotrophy YNB Glucose   0.3 0.5 0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine   0.2 0.4 0.5 -0.0
auxotrophy YNB Glucose 75mM Arginine   0.3 0.6 0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.0 0.0 0.5 0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.1 0.3 0.5 0.8
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