Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3501: 11869 - KOG3791 Predicted RNA-binding protein involved in translational regulation, at 248480 to 250835 11869 mRNA_3502: 11870 - Hypothetical Protein, at 250882 to 251460 11870 mRNA_3503: 11871 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 251865 to 254204 11871 mRNA_3504: 11872 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 255381 to 257476 11872 mRNA_3505: 11873 - KOG3699 Cytoskeletal protein Adducin, at 257806 to 259201 11873
Group Condition mRNA_3501 mRNA_3502 mRNA_3503 mRNA_3504 mRNA_3505
11869
11870
11871
11872
11873
growth on oleic acid YNB Oleic Acid -0.7   0.3 0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4   0.1 -0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2   0.0 -0.2 0.1
auxotrophy YNB Glucose -1.3   0.3 0.5 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1   -0.2 0.4 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.0   -0.0 -0.1 0.1
growth on oleic acid YNB Glucose -0.5   0.4 0.1 -0.0
auxotrophy Dropout Complete -0.5   0.2 0.2 0.1
growth on ypd YPD 0.7   -0.5 0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1   -0.0 -0.0 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1   -0.1 0.3 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   0.0 0.3 0.4
ypd buoyancy 40 hrs No Buoyancy Separation 1.0   -0.2 -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.0   0.1 0.0 0.5
ypd buoyancy 40 hrs High Buoyancy 0.3   -0.1 0.1 0.3
auxotrophy YNB Glucose 75mM Methionine -0.4   0.2 0.4 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   -0.1 0.3 0.5
auxotrophy YNB Glucose 75mM Arginine -0.2   0.3 0.6 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5   0.0 0.0 0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.6   0.2 0.1 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.6   0.0 0.2 0.4
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