Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3500: 11868 - KOG2519 5'-3' exonuclease, at 245700 to 248074 11868 mRNA_3501: 11869 - KOG3791 Predicted RNA-binding protein involved in translational regulation, at 248480 to 250835 11869 mRNA_3502: 11870 - Hypothetical Protein, at 250882 to 251460 11870 mRNA_3503: 11871 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 251865 to 254204 11871 mRNA_3504: 11872 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 255381 to 257476 11872
Group Condition mRNA_3500 mRNA_3501 mRNA_3502 mRNA_3503 mRNA_3504
11868
11869
11870
11871
11872
ypd buoyancy 40 hrs High Buoyancy -1.6 0.3   -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.9 1.0   -0.2 -0.2
auxotrophy YNB Glucose -0.2 -1.3   0.3 0.5
auxotrophy Dropout Complete -0.6 -0.5   0.2 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.5 0.1   -0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.4   0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.9 -0.2   0.3 0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.2   0.0 -0.2
growth on oleic acid YNB Oleic Acid 0.1 -0.7   0.3 0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.4   0.2 0.4
growth on oleic acid YNB Glucose 0.1 -0.5   0.4 0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.0   0.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.2   0.0 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.0   -0.0 -0.1
growth on ypd YPD 0.2 0.7   -0.5 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.6   0.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.6   0.2 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 2.5 -0.1   -0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 2.5 -0.1   -0.2 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 2.7 0.2   -0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 3.0 0.5   0.0 0.0
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