Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3499: 11867 - K00231 PPOX, hemY oxygen-dependent protoporphyrinogen oxidase, at 243095 to 244996 11867 mRNA_3500: 11868 - KOG2519 5'-3' exonuclease, at 245700 to 248074 11868 mRNA_3501: 11869 - KOG3791 Predicted RNA-binding protein involved in translational regulation, at 248480 to 250835 11869 mRNA_3502: 11870 - Hypothetical Protein, at 250882 to 251460 11870 mRNA_3503: 11871 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 251865 to 254204 11871
Group Condition mRNA_3499 mRNA_3500 mRNA_3501 mRNA_3502 mRNA_3503
11867
11868
11869
11870
11871
ypd buoyancy 40 hrs High Buoyancy   -1.6 0.3   -0.1
auxotrophy YNB Glucose   -0.2 -1.3   0.3
ypd buoyancy 40 hrs No Buoyancy Separation   -1.9 1.0   -0.2
auxotrophy Dropout Complete   -0.6 -0.5   0.2
auxotrophy YNB Glucose 75mM Arginine   -0.9 -0.2   0.3
auxotrophy YNB Glucose 75mM Methionine   -0.2 -0.4   0.2
ypd buoyancy 40 hrs Median Buoyancy   -0.5 0.1   -0.0
growth on oleic acid YNB Oleic Acid   0.1 -0.7   0.3
facs on lipid accumulation Sorted Low BODIPY Gate   0.2 -0.4   0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   0.1 -0.2   0.0
growth on oleic acid YNB Glucose   0.1 -0.5   0.4
facs on lipid accumulation Sorted No BODIPY Gate   0.2 -0.2   0.0
growth on ricinoleic acid YNB Glucose   0.1 -0.0   0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.2 0.6   0.0
growth on ypd YPD   0.2 0.7   -0.5
facs on lipid accumulation Sorted High BODIPY Gate   0.5 0.0   -0.0
growth on ricinoleic acid YNB Ricinoleic Acid   0.2 0.6   0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   2.5 -0.1   -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   2.5 -0.1   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   2.7 0.2   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   3.0 0.5   0.0
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