Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3488: 11856 - Hypothetical Protein, at 224405 to 225242 11856 mRNA_3489: 11857 - BLAST NADH-ubiquinone oxidoreductase, 17.2kDa subunit [..., at 226345 to 227373 11857 mRNA_3490: 11858 - K05236 COPA, RET1 coatomer subunit alpha, at 227582 to 231954 11858 mRNA_3491: 11859 - K03007 RPB10, POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5, at 232549 to 233056 11859 mRNA_3492: 11860 - HMMPfam-Cytidine and deoxycytidylate deaminase zinc-binding region-PF00383,SUPERFAMILY--SSF53927, at 233269 to 234150 11860
Group Condition mRNA_3488 mRNA_3489 mRNA_3490 mRNA_3491 mRNA_3492
11856
11857
11858
11859
11860
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -2.1     -0.3
auxotrophy YNB Glucose -0.3 -1.7     0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2     -1.1
growth on oleic acid YNB Glucose -0.0 -1.5     0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -1.4     -0.1
auxotrophy Dropout Complete 0.0 -0.8     -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.3     -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.5     0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 0.2     -0.2
growth on oleic acid YNB Oleic Acid 0.1 -0.8     0.4
growth on ricinoleic acid YNB Glucose -0.2 -0.3     0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 0.0     0.4
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.4     0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.6     0.6
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.2     0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.1     0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.7     -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.8     0.1
growth on ypd YPD 0.2 0.1     0.8
ypd buoyancy 40 hrs High Buoyancy 0.1 0.6     0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.7     0.4
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