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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3487: 11855 - Hypothetical Protein, at 221042 to 223920
11855
mRNA_3488: 11856 - Hypothetical Protein, at 224405 to 225242
11856
mRNA_3489: 11857 - BLAST NADH-ubiquinone oxidoreductase, 17.2kDa subunit [..., at 226345 to 227373
11857
mRNA_3490: 11858 - K05236 COPA, RET1 coatomer subunit alpha, at 227582 to 231954
11858
mRNA_3491: 11859 - K03007 RPB10, POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5, at 232549 to 233056
11859
Group
Condition
mRNA_3487
mRNA_3488
mRNA_3489
mRNA_3490
mRNA_3491
11855
11856
11857
11858
11859
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.1
-2.1
auxotrophy
YNB Glucose
-0.0
-0.3
-1.7
growth on oleic acid
YNB Glucose
0.1
-0.0
-1.5
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.1
-1.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.4
-0.5
auxotrophy
Dropout Complete
-0.0
0.0
-0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.6
0.0
growth on oleic acid
YNB Oleic Acid
0.0
0.1
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.0
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.6
0.2
growth on ricinoleic acid
YNB Glucose
0.1
-0.2
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.3
0.8
growth on ypd
YPD
0.1
0.2
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.1
0.7
ypd buoyancy
40 hrs High Buoyancy
0.1
0.1
0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.5
0.7
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