Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3487: 11855 - Hypothetical Protein, at 221042 to 223920 11855 mRNA_3488: 11856 - Hypothetical Protein, at 224405 to 225242 11856 mRNA_3489: 11857 - BLAST NADH-ubiquinone oxidoreductase, 17.2kDa subunit [..., at 226345 to 227373 11857 mRNA_3490: 11858 - K05236 COPA, RET1 coatomer subunit alpha, at 227582 to 231954 11858 mRNA_3491: 11859 - K03007 RPB10, POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5, at 232549 to 233056 11859
Group Condition mRNA_3487 mRNA_3488 mRNA_3489 mRNA_3490 mRNA_3491
11855
11856
11857
11858
11859
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.1 -2.1    
auxotrophy YNB Glucose -0.0 -0.3 -1.7    
growth on oleic acid YNB Glucose 0.1 -0.0 -1.5    
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.1 -1.4    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.4 -0.5    
auxotrophy Dropout Complete -0.0 0.0 -0.8    
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.6 0.0    
growth on oleic acid YNB Oleic Acid 0.0 0.1 -0.8    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.6    
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 -0.2    
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.0 -0.4    
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.6 0.2    
growth on ricinoleic acid YNB Glucose 0.1 -0.2 -0.3    
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 -0.3    
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 0.2    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.3 -0.1    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.3 0.8    
growth on ypd YPD 0.1 0.2 0.1    
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.1 0.7    
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 0.6    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.5 0.7    
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