Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3483: 11851 - KOG0683 Glutamine synthetase, at 215219 to 215380 11851 mRNA_3484: 11852 - Hypothetical Protein, at 215787 to 216323 11852 mRNA_3485: 11853 - HMMPfam-Neugrin-PF06413, at 216830 to 218374 11853 mRNA_3486: 11854 - K04563 CDC28, CDC2 cyclin-dependent kinase, at 218706 to 220470 11854 mRNA_3487: 11855 - Hypothetical Protein, at 221042 to 223920 11855
Group Condition mRNA_3483 mRNA_3484 mRNA_3485 mRNA_3486 mRNA_3487
11851
11852
11853
11854
11855
ypd buoyancy 40 hrs Low Buoyancy -0.6 -1.1     -0.2
auxotrophy Dropout Complete -0.1 -0.9     -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.7     -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.6     -0.2
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.4     0.1
growth on ypd YPD -0.8 -0.0     0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.6     -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.8     0.0
growth on oleic acid YNB Glucose -0.2 -0.4     0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.8     0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1     -0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.3     -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.2     -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.2     -0.2
auxotrophy YNB Glucose 0.1 -0.3     -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.2     -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.1     -0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.0     -0.1
growth on ricinoleic acid YNB Glucose -0.3 0.4     0.1
growth on oleic acid YNB Oleic Acid -0.1 0.6     0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 1.4     0.2
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