Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3481: 11849 - K01752 E4.3.1.17, sdaA, sdaB, tdcG L-serine dehydratase, at 211233 to 213567 11849 mRNA_3482: 11850 - K03861 PIGP, GPI19, DSCR5 phosphatidylinositol glycan, class P, at 213922 to 215101 11850 mRNA_3483: 11851 - KOG0683 Glutamine synthetase, at 215219 to 215380 11851 mRNA_3484: 11852 - Hypothetical Protein, at 215787 to 216323 11852 mRNA_3485: 11853 - HMMPfam-Neugrin-PF06413, at 216830 to 218374 11853
Group Condition mRNA_3481 mRNA_3482 mRNA_3483 mRNA_3484 mRNA_3485
11849
11850
11851
11852
11853
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 -0.6 -1.1  
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.9 -0.1 0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2 -0.1 -0.6  
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.2 -0.3 -0.1  
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1 -0.5 -0.4  
auxotrophy Dropout Complete -0.0 0.1 -0.1 -0.9  
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1 -0.2 -0.7  
growth on ypd YPD 0.1 -0.1 -0.8 -0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.3 0.0 -0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.2 0.2 -0.8  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.3 -0.2 -0.6  
growth on oleic acid YNB Glucose 0.4 -0.1 -0.2 -0.4  
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.3 0.2 -0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.5 0.1 -0.8  
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.4 0.1 -0.0  
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.0 0.1 -0.3  
auxotrophy YNB Glucose 0.2 0.2 0.1 -0.3  
growth on ricinoleic acid YNB Glucose 0.0 0.4 -0.3 0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.6 -0.3 0.2  
growth on oleic acid YNB Oleic Acid 0.1 0.1 -0.1 0.6  
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.3 -0.2 1.4  
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