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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3481: 11849 - K01752 E4.3.1.17, sdaA, sdaB, tdcG L-serine dehydratase, at 211233 to 213567
11849
mRNA_3482: 11850 - K03861 PIGP, GPI19, DSCR5 phosphatidylinositol glycan, class P, at 213922 to 215101
11850
mRNA_3483: 11851 - KOG0683 Glutamine synthetase, at 215219 to 215380
11851
mRNA_3484: 11852 - Hypothetical Protein, at 215787 to 216323
11852
mRNA_3485: 11853 - HMMPfam-Neugrin-PF06413, at 216830 to 218374
11853
Group
Condition
mRNA_3481
mRNA_3482
mRNA_3483
mRNA_3484
mRNA_3485
11849
11850
11851
11852
11853
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.2
-0.6
-1.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.9
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.2
-0.1
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.2
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
-0.5
-0.4
auxotrophy
Dropout Complete
-0.0
0.1
-0.1
-0.9
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
-0.2
-0.7
growth on ypd
YPD
0.1
-0.1
-0.8
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.2
0.2
-0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.3
-0.2
-0.6
growth on oleic acid
YNB Glucose
0.4
-0.1
-0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.3
0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
0.5
0.1
-0.8
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.4
0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.0
0.1
-0.3
auxotrophy
YNB Glucose
0.2
0.2
0.1
-0.3
growth on ricinoleic acid
YNB Glucose
0.0
0.4
-0.3
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.6
-0.3
0.2
growth on oleic acid
YNB Oleic Acid
0.1
0.1
-0.1
0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.3
-0.2
1.4
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