Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3468: 11836 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 175378 to 177362 11836 mRNA_3469: 11837 - K07512 MECR, NRBF1 mitochondrial trans-2-enoyl-CoA reductase, at 177477 to 179110 11837 mRNA_3470: 11838 - KOG1492 C3H1-type Zn-finger protein, at 179330 to 181535 11838 mRNA_3471: 11839 - Interpro Transcription-silencing protein, cryptic loci regulator Clr2 Transcription-silencing protein Clr2, at 181846 to 184835 11839 mRNA_3472: 11840 - HMMPfam-Xylose isomerase-like TIM barrel-PF01261,SUPERFAMILY--SSF51658, at 185364 to 186603 11840
Group Condition mRNA_3468 mRNA_3469 mRNA_3470 mRNA_3471 mRNA_3472
11836
11837
11838
11839
11840
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.3 -0.8 0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.2 -0.7 -0.1 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.2 -0.4 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.2 -0.9 0.3 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.6 0.0 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.1 -1.1 0.3 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.4 -0.2 -0.2 0.3
growth on oleic acid YNB Oleic Acid 0.1 -0.1 -0.2 -0.2 0.2
growth on oleic acid YNB Glucose 0.1 -0.1 -0.3 -0.0 0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 0.1 0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.2 0.1 -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.2 -0.1 0.1 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.1 -0.1 0.4 -0.0
auxotrophy Dropout Complete 0.4 -0.3 0.1 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.0 0.2 0.2 -0.1
growth on ypd YPD 0.3 0.1 0.1 -0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.0 0.8 -0.1 -0.2
auxotrophy YNB Glucose 0.4 -0.0 0.2 0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 0.3 0.2 -0.3 0.1
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.0 0.5 0.1 0.0
growth on ricinoleic acid YNB Glucose 0.1 0.4 0.1 0.1 0.2
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