Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3461: 11829 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 154218 to 156143 11829 mRNA_3462: 11830 - K17978 NUM1 nuclear migration protein NUM1, at 156661 to 162747 11830 mRNA_3463: 11831 - Hypothetical Protein, at 163497 to 164279 11831 mRNA_3464: 11832 - K02684 PRI1 DNA primase small subunit, at 164658 to 166622 11832 mRNA_3465: 11833 - KOG1176 Acyl-CoA synthetase, at 166819 to 169091 11833
Group Condition mRNA_3461 mRNA_3462 mRNA_3463 mRNA_3464 mRNA_3465
11829
11830
11831
11832
11833
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -1.0 0.1   -0.2
growth on ricinoleic acid YNB Glucose -0.0 -1.0 0.1   -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -1.3 0.2   -0.1
auxotrophy Dropout Complete -0.2 -0.7 0.1   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.5 -0.4   -0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.7 0.0   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 0.1   -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.5 0.0   -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -1.0 -0.1   0.5
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.3 -0.2   0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.3 0.1   0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.3 -0.1   0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.2 -0.1   0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 0.2 0.2   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.4 -0.6   0.1
growth on oleic acid YNB Oleic Acid -0.1 0.4 -0.2   0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 0.1 0.3   0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.5 -0.0 -0.2   0.4
auxotrophy YNB Glucose -0.1 0.4 0.3   0.1
growth on oleic acid YNB Glucose 0.4 0.1 0.5   0.1
growth on ypd YPD -0.2 1.4 0.3   -0.1
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