Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_3445: 11813 - HMMPfam-BRO1-like domain-PF03097,ProSiteProfiles-BRO1 domain profile.-PS51180,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SMART-BRO1-like domain-SM01041, at 120363 to 121884
11813
mRNA_3446: 11814 - K07393 ECM4 putative glutathione S-transferase, at 122538 to 123846
11814
mRNA_3447: 11815 - HMMPfam-AhpC/TSA antioxidant enzyme-PF13911,SUPERFAMILY--SSF52833, at 124224 to 125009
11815
mRNA_3448: 11816 - HMMPfam-Peptidase M50B-like-PF13398, at 125268 to 126548
11816
mRNA_3449: 11817 - HMMPfam-Integral peroxisomal membrane peroxin-PF06398, at 126631 to 128651
11817
Group
Condition
mRNA_3445
mRNA_3446
mRNA_3447
mRNA_3448
mRNA_3449
11813
11814
11815
11816
11817
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.5
0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
0.2
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.3
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.3
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.2
0.2
growth on ypd
YPD
0.1
0.0
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.5
0.3
auxotrophy
Dropout Complete
0.7
-0.1
-0.0
growth on oleic acid
YNB Glucose
0.6
-0.1
0.1
growth on ricinoleic acid
YNB Glucose
0.7
0.1
0.2
growth on oleic acid
YNB Oleic Acid
0.3
0.3
0.5
auxotrophy
YNB Glucose 75mM Methionine
0.6
0.6
0.1
auxotrophy
YNB Glucose
0.8
0.3
0.3
auxotrophy
YNB Glucose 75mM Arginine
0.8
0.6
0.2
remove
mRNA_3445
plot
remove
mRNA_3446
plot
remove
mRNA_3447
remove
mRNA_3448
plot
remove
mRNA_3449
plot