Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3442: 11810 - SUPERFAMILY--SSF52047, at 113931 to 115281 11810 mRNA_3443: 11811 - K06694 PSMD10 26S proteasome non-ATPase regulatory subunit 10, at 116448 to 118253 11811 mRNA_3444: 11812 - Hypothetical Protein, at 118476 to 119519 11812 mRNA_3445: 11813 - HMMPfam-BRO1-like domain-PF03097,ProSiteProfiles-BRO1 domain profile.-PS51180,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SMART-BRO1-like domain-SM01041, at 120363 to 121884 11813 mRNA_3446: 11814 - K07393 ECM4 putative glutathione S-transferase, at 122538 to 123846 11814
Group Condition mRNA_3442 mRNA_3443 mRNA_3444 mRNA_3445 mRNA_3446
11810
11811
11812
11813
11814
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.1 0.1 -0.8 0.2
growth on ypd YPD -0.1 -0.3 -0.2 0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.2 -0.1 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.5 0.3 -0.7 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 0.2 -0.2 -0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 0.4 0.2 -0.7 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.4 0.1 0.2 -0.5 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.5 0.3 0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.0 0.3 -0.3 0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.1 0.4 -0.3 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.1 0.2 -0.0 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.0 0.4 -0.3 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.0 0.3 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.7 -0.3 0.5 0.1
growth on oleic acid YNB Oleic Acid -0.0 0.2 0.0 0.3 0.3
growth on oleic acid YNB Glucose 0.4 0.0 -0.1 0.6 -0.1
auxotrophy Dropout Complete 0.2 0.3 0.0 0.7 -0.1
growth on ricinoleic acid YNB Glucose -0.0 -0.1 0.5 0.7 0.1
auxotrophy YNB Glucose 0.3 0.4 -0.0 0.8 0.3
auxotrophy YNB Glucose 75mM Arginine 0.2 0.2 -0.1 0.8 0.6
auxotrophy YNB Glucose 75mM Methionine 0.5 0.3 0.0 0.6 0.6
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