Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3439: 11807 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 104043 to 108423 11807 mRNA_3440: 11808 - SUPERFAMILY--SSF56112, at 110002 to 112287 11808 mRNA_3441: 11809 - K00729 ALG5 dolichyl-phosphate beta-glucosyltransferase, at 112497 to 113807 11809 mRNA_3442: 11810 - SUPERFAMILY--SSF52047, at 113931 to 115281 11810 mRNA_3443: 11811 - K06694 PSMD10 26S proteasome non-ATPase regulatory subunit 10, at 116448 to 118253 11811
Group Condition mRNA_3439 mRNA_3440 mRNA_3441 mRNA_3442 mRNA_3443
11807
11808
11809
11810
11811
growth on ypd YPD -0.4 -0.3 -0.2 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.1 0.0 0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.0 -0.2 0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 0.2 -0.2 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 0.2 0.2 0.5 0.2
growth on oleic acid YNB Oleic Acid 0.5 0.1 -0.1 -0.0 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.1 0.0 0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 0.0 0.2 -0.0 0.1
growth on oleic acid YNB Glucose 0.8 -0.3 -0.1 0.4 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.5 0.2 0.1 -0.2 0.2
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.2 0.3 0.2 0.2
ypd buoyancy 40 hrs High Buoyancy 0.3 0.2 0.0 0.4 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.2 -0.3 0.4 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.1 0.2 -0.1 0.5
growth on ricinoleic acid YNB Glucose 1.2 0.1 0.0 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 1.0 0.0 0.4 0.3 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 1.1 -0.0 0.3 -0.2 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.4 0.3 -0.2 0.7
auxotrophy Dropout Complete 0.8 -0.0 0.3 0.2 0.3
auxotrophy YNB Glucose 75mM Methionine 0.5 -0.0 0.2 0.5 0.3
auxotrophy YNB Glucose 0.7 0.0 0.5 0.3 0.4
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