Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94407 to 97285 11804 mRNA_3437: 11805 - K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3, at 97433 to 99630 11805 mRNA_3438: 11806 - KOG1162 Predicted small molecule transporter, at 99777 to 103344 11806 mRNA_3439: 11807 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 104043 to 108423 11807 mRNA_3440: 11808 - SUPERFAMILY--SSF56112, at 110002 to 112287 11808
Group Condition mRNA_3436 mRNA_3437 mRNA_3438 mRNA_3439 mRNA_3440
11804
11805
11806
11807
11808
growth on ypd YPD -0.1 0.3 -0.1 -0.4 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.6 0.0 -0.6 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.3 0.2 -0.6 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.3 -0.0 -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.3 -0.7 1.0 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.0 0.1 0.3 0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 0.0 0.1 0.3 0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 0.6 -0.1 0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.0 0.6 -0.4 0.5 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.2 0.2 0.4 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.3 -0.1 0.2 0.4
growth on oleic acid YNB Glucose -0.1 0.5 -0.1 0.8 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.5 0.1 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.4 0.3 0.4 0.1
auxotrophy Dropout Complete -0.1 0.7 -0.3 0.8 -0.0
auxotrophy YNB Glucose -0.1 0.6 -0.1 0.7 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.3 0.7 0.3 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.6 -0.2 1.1 -0.0
growth on oleic acid YNB Oleic Acid -0.1 0.7 0.1 0.5 0.1
growth on ricinoleic acid YNB Glucose -0.2 0.4 -0.1 1.2 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.5 0.2 0.5 0.2
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