Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3435: 11803 - K12614 DDX6, RCK, DHH1 ATP-dependent RNA helicase DDX6/DHH1, at 91986 to 94017 11803 mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94407 to 97285 11804 mRNA_3437: 11805 - K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3, at 97433 to 99630 11805 mRNA_3438: 11806 - KOG1162 Predicted small molecule transporter, at 99777 to 103344 11806 mRNA_3439: 11807 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 104043 to 108423 11807
Group Condition mRNA_3435 mRNA_3436 mRNA_3437 mRNA_3438 mRNA_3439
11803
11804
11805
11806
11807
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.3 0.6 0.0 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.3 0.3 0.2 -0.6
growth on ypd YPD -0.5 -0.1 0.3 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.0 0.3 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 -0.0 0.2 0.2 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 0.0 0.3 -0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 -0.3 0.4 0.3 0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 0.0 0.1 0.3
auxotrophy YNB Glucose 75mM Methionine -0.4 0.0 0.6 -0.4 0.5
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.0 0.6 -0.1 0.3
auxotrophy YNB Glucose -0.4 -0.1 0.6 -0.1 0.7
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.2 0.3 -0.7 1.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.0 0.0 0.1 0.3
growth on oleic acid YNB Glucose -0.5 -0.1 0.5 -0.1 0.8
auxotrophy Dropout Complete -0.3 -0.1 0.7 -0.3 0.8
growth on ricinoleic acid YNB Glucose -0.5 -0.2 0.4 -0.1 1.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.3 0.5 0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.3 -0.3 0.7 0.3
growth on oleic acid YNB Oleic Acid -0.2 -0.1 0.7 0.1 0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.1 0.5 0.2 0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 0.6 -0.2 1.1
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