Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3434: 11802 - K00237 SDHD, SDH4 succinate dehydrogenase (ubiquinone) membrane anchor subunit, at 90402 to 91512 11802 mRNA_3435: 11803 - K12614 DDX6, RCK, DHH1 ATP-dependent RNA helicase DDX6/DHH1, at 91986 to 94017 11803 mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94407 to 97285 11804 mRNA_3437: 11805 - K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3, at 97433 to 99630 11805 mRNA_3438: 11806 - KOG1162 Predicted small molecule transporter, at 99777 to 103344 11806
Group Condition mRNA_3434 mRNA_3435 mRNA_3436 mRNA_3437 mRNA_3438
11802
11803
11804
11805
11806
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.9 -0.3 0.4 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.8 -0.0 0.2 0.2
growth on ricinoleic acid YNB Ricinoleic Acid   -0.8 -0.3 0.6 0.0
growth on ricinoleic acid YNB Glucose   -0.5 -0.2 0.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.3 -0.2 0.3 -0.7
growth on ypd YPD   -0.5 -0.1 0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   -0.4 -0.3 0.3 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.5 0.0 0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine   -0.4 0.0 0.6 -0.4
growth on oleic acid YNB Glucose   -0.5 -0.1 0.5 -0.1
auxotrophy YNB Glucose   -0.4 -0.1 0.6 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2 -0.3 0.6 -0.2
auxotrophy Dropout Complete   -0.3 -0.1 0.7 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.3 0.0 0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy   -0.1 -0.0 0.0 0.1
auxotrophy YNB Glucose 75mM Arginine   -0.4 -0.0 0.6 -0.1
ypd buoyancy 40 hrs Median Buoyancy   0.2 0.0 0.0 0.1
growth on oleic acid YNB Oleic Acid   -0.2 -0.1 0.7 0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.2 0.1 0.5 0.2
ypd buoyancy 40 hrs No Buoyancy Separation   -0.0 0.3 -0.3 0.7
facs on lipid accumulation Sorted No BODIPY Gate   -0.0 0.3 0.5 0.1
remove
mRNA_3434
plot		 remove
mRNA_3435
plot		 remove
mRNA_3436		 remove
mRNA_3437
plot		 remove
mRNA_3438
plot