Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3433: 11801 - HMMPfam-Rtr1/RPAP2 family-PF04181,HMMPfam-VMA21-like domain-PF09446,ProSiteProfiles-RTR1-type zinc finger.-PS51479, at 88231 to 90113 11801 mRNA_3434: 11802 - K00237 SDHD, SDH4 succinate dehydrogenase (ubiquinone) membrane anchor subunit, at 90402 to 91512 11802 mRNA_3435: 11803 - K12614 DDX6, RCK, DHH1 ATP-dependent RNA helicase DDX6/DHH1, at 91986 to 94017 11803 mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94407 to 97285 11804 mRNA_3437: 11805 - K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3, at 97433 to 99630 11805
Group Condition mRNA_3433 mRNA_3434 mRNA_3435 mRNA_3436 mRNA_3437
11801
11802
11803
11804
11805
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0   -0.9 -0.3 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0   -0.8 -0.0 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   -0.4 -0.3 0.3
growth on ypd YPD 0.0   -0.5 -0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0   -0.5 0.0 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   -0.8 -0.3 0.6
growth on ricinoleic acid YNB Glucose 0.1   -0.5 -0.2 0.4
growth on oleic acid YNB Glucose -0.1   -0.5 -0.1 0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.0   -0.0 0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.0   -0.1 -0.0 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1   -0.3 0.0 0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3   0.3 -0.2 0.3
auxotrophy YNB Glucose 0.0   -0.4 -0.1 0.6
auxotrophy YNB Glucose 75mM Methionine 0.0   -0.4 0.0 0.6
auxotrophy YNB Glucose 75mM Arginine -0.0   -0.4 -0.0 0.6
ypd buoyancy 40 hrs Median Buoyancy -0.0   0.2 0.0 0.0
auxotrophy Dropout Complete 0.0   -0.3 -0.1 0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3   -0.2 -0.3 0.6
ypd buoyancy 40 hrs Low Buoyancy 0.2   -0.2 0.1 0.5
growth on oleic acid YNB Oleic Acid 0.3   -0.2 -0.1 0.7
facs on lipid accumulation Sorted No BODIPY Gate 0.0   -0.0 0.3 0.5
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