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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3425: 11793 - K00789 metK S-adenosylmethionine synthetase, at 67905 to 69207
11793
mRNA_3426: 11794 - K08498 STX6 syntaxin 6, at 69287 to 70405
11794
mRNA_3427: 11795 - HMMPfam-Domain of unknown function (DUF1996)-PF09362, at 70674 to 72222
11795
mRNA_3428: 11796 - Hypothetical Protein, at 72925 to 76768
11796
mRNA_3429: 11797 - K06636 SMC1 structural maintenance of chromosome 1, at 77448 to 78675
11797
Group
Condition
mRNA_3425
mRNA_3426
mRNA_3427
mRNA_3428
mRNA_3429
11793
11794
11795
11796
11797
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.6
-0.7
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.1
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
0.4
-0.5
-0.1
growth on oleic acid
YNB Glucose
-0.3
-0.1
0.2
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.2
-0.2
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.2
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.1
-0.6
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
0.6
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.6
0.0
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.2
-0.5
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.4
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.6
-0.3
-0.4
auxotrophy
Dropout Complete
-0.3
0.5
0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.3
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.3
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.2
-0.1
-0.4
growth on ricinoleic acid
YNB Glucose
-0.2
0.8
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
0.2
0.1
0.2
-0.2
auxotrophy
YNB Glucose
-0.1
0.6
-0.0
-0.0
growth on ypd
YPD
0.4
0.3
0.5
-0.8
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.5
0.1
0.5
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