Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3419: 11787 - K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase, at 50010 to 53314 11787 mRNA_3420: 11788 - HMMPfam-ATP dependent DNA ligase domain-PF01068,HMMPfam-DNA ligase N terminus-PF04675,ProSiteProfiles-ATP-dependent DNA ligase family profile.-PS50160,SUPERFAMILY--SSF56091, at 53705 to 57912 11788 mRNA_3421: 11789 - K14297 NUP98, ADAR2, NUP116 nuclear pore complex protein Nup98-Nup96, at 58356 to 61690 11789 mRNA_3422: 11790 - KOG2882 p-Nitrophenyl phosphatase, at 61810 to 63146 11790 mRNA_3423: 11791 - KOG3655 Drebrins and related actin binding proteins, at 63597 to 64502 11791
Group Condition mRNA_3419 mRNA_3420 mRNA_3421 mRNA_3422 mRNA_3423
11787
11788
11789
11790
11791
facs on lipid accumulation Sorted High BODIPY Gate -1.4 -0.3   -0.4 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -2.2 -0.4   0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 -0.3   -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.3   -0.0 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.4   0.1 -0.9
growth on oleic acid YNB Oleic Acid -0.7 0.4   -1.0 -0.1
growth on ricinoleic acid YNB Glucose -0.7 -0.3   0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 0.3   -0.2 -0.5
auxotrophy YNB Glucose -0.2 0.1   -0.5 -0.3
ypd buoyancy 40 hrs Low Buoyancy -1.3 0.1   0.4 0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 0.4   -0.4 -0.4
auxotrophy Dropout Complete -0.2 0.5   -0.4 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.0   -0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.1   -0.3 -0.3
growth on oleic acid YNB Glucose -0.1 -0.0   -0.0 -0.4
growth on ypd YPD -0.3 0.0   -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.0   -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.1   -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.3   0.2 0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 0.4   0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.3   0.1 0.5
remove
mRNA_3419
plot		 remove
mRNA_3420
plot		 remove
mRNA_3421		 remove
mRNA_3422
plot		 remove
mRNA_3423
plot