Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3409: 11777 - K05658 ABCB1, CD243 ATP-binding cassette, subfamily B (MDR/TAP), member 1, at 20794 to 26649 11777 mRNA_3410: 11778 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 27190 to 28187 11778 mRNA_3411: 11779 - SUPERFAMILY--SSF81296, at 29914 to 31700 11779 mRNA_3412: 11780 - KOG0548 Molecular co-chaperone STI1, at 32248 to 34426 11780 mRNA_3413: 11781 - K00622 nat arylamine N-acetyltransferase, at 34768 to 35867 11781
Group Condition mRNA_3409 mRNA_3410 mRNA_3411 mRNA_3412 mRNA_3413
11777
11778
11779
11780
11781
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.4 -1.8   0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.9 -0.4   -0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.5 -1.4   0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.2 -1.1   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.6 0.1   -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.3 -0.2   0.1
growth on ypd YPD 0.2 0.3 -0.4   -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.1 -0.0   0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.1 0.2   -0.2
growth on oleic acid YNB Glucose 0.0 -0.3 -0.1   0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.2 -0.3   0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.1 -0.4   0.6
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.2 0.1   -0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.5 0.0   0.8
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.5 -0.6   0.5
auxotrophy Dropout Complete -0.0 0.7 0.1   -0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 0.4 0.3   -0.2
auxotrophy YNB Glucose -0.1 0.6 0.1   0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 0.9 0.0   -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 0.5 -0.0   0.3
growth on oleic acid YNB Oleic Acid 0.2 0.3 0.1   0.4
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